PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG039910.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TALE

Protein Properties

Length: 357aa MW: 40663.1 Da PI: 10.1388

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG039910.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	30	9.1e-10	283	318	20	55
HHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 20 eknrypsaeereeLAkklgLterqVkvWFqNrRake 55 +k +yps++e+ LA+++gL+++q+ +WF N+R ++ TRIDC2BG039910.2 283 YKWPYPSETEKIALAESTGLDQKQINNWFINQRKRH 318 4679*****************************885 PP
2	ELK	37.8	4.1e-13	238	259	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK qLl+KYsgyL+sL+qEFs TRIDC2BG039910.2 238 ELKYQLLKKYSGYLSSLRQEFS 259 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
AVHGAARHRE EISIALGISE LEKGAAAAPR LLHPSCSCSH CRQRRWLPGQ ARWAERTTAH 60 RSRCTRPPQQ PGRRSTSSTT TRAEARRSRK RRLRPLRPRS WRTPSTPPSS SPTSTARKVG 120 APPDVLERLT AMAAKLDAHP PGRLHEARDP ELDQFMEAYC NMLAKYREEL TRPIEEAMEF 180 LKRVEAQLDS ITGGGHGSAR LSLADGKCEG VGSSEDEMDA SGRENEPPEI DPRAEDKELK 240 YQLLKKYSGY LSSLRQEFSK KKKKGKLPKE ARQKLLHWWE LHYKWPYPSE TEKIALAEST 300 GLDQKQINNW FINQRKRHWK PSEDMPFVMM EGFHPQNAAA LYMDGQFMAD GMYRLGS

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

AVHGAARHRE EISIALGISE LEKGAAAAPR LLHPSCSCSH CRQRRWLPGQ ARWAERTTAH  60
RSRCTRPPQQ PGRRSTSSTT TRAEARRSRK RRLRPLRPRS WRTPSTPPSS SPTSTARKVG  120
APPDVLERLT AMAAKLDAHP PGRLHEARDP ELDQFMEAYC NMLAKYREEL TRPIEEAMEF  180
LKRVEAQLDS ITGGGHGSAR LSLADGKCEG VGSSEDEMDA SGRENEPPEI DPRAEDKELK  240
YQLLKKYSGY LSSLRQEFSK KKKKGKLPKE ARQKLLHWWE LHYKWPYPSE TEKIALAEST  300
GLDQKQINNW FINQRKRHWK PSEDMPFVMM EGFHPQNAAA LYMDGQFMAD GMYRLGS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	86	93	RRSRKRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	4e-92	TALE family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG039910.2