PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG040850.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 190aa    MW: 21881.8 Da    PI: 10.1562
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG040850.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR171.12.5e-2226112389
              FAR1   3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                       + +Y+++vGF+vrk++++ksk +g++t+ ++vC keg+r++++++ +  +++raetrt C+ ++++++++  g +evt+l+  HnH+l
  TRIDC2BG040850.1  26 WVNYGSQVGFEVRKRYTNKSKFDGKVTSCRYVCAKEGYRRQNNRN-RVIKNPRAETRTLCDVHMTLTLDRmVGDYEVTELVPVHNHNL 112
                       789***************************************999.999*********************9***************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
RKGLNLGRAP QVGVRFKNLD EAWSSWVNYG SQVGFEVRKR YTNKSKFDGK VTSCRYVCAK  60
EGYRRQNNRN RVIKNPRAET RTLCDVHMTL TLDRMVGDYE VTELVPVHNH NLYMPQTFHL  120
MVSQRKISEV QAFEIETADD TGIAPKVAHE LASRQVGGPM NLSYTYRDQK NHLQSKRQRE  180
LAYGQAGSML
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-20FAR1 family protein