PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG042120.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 255aa    MW: 28023.7 Da    PI: 4.753
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG042120.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.41.3e-1375119655
                       HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +Er RR+++N+++ +Lr+++P+      +K++Ka+i + A+eYI++Lq
  TRIDC2BG042120.5  75 ILMERDRRRKLNEKLYTLRSVVPNI-----TKMDKASIIKDAIEYIQQLQ 119
                       579*********************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MDPDMGENFA YYWETQRYLE SEELVDSIFV GATEDAISYY DSSSPDGSHS SSTPMGSALP  60
GAGMGMDGTG ANKNILMERD RRRKLNEKLY TLRSVVPNIT KMDKASIIKD AIEYIQQLQA  120
EERQMEAEVS ALESATGAED DYDGGLSVDQ VSSAQRKKVK RALSVSSMND ALLAAAATVA  180
SPPVEVLELR VSEVSEKVLV VSVTCSKQRD AMTKVCRALE ELRLRVITAN ITSVSGCLMH  240
TLFVEVRRRR PPQLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.22e-40bHLH family protein