PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG042120.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 178aa    MW: 19229.1 Da    PI: 6.121
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG042120.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.87.2e-0795120630
                       HHHHHHHHHHHHHHHHHHHCTSCC.C CS
               HLH   6 nerErrRRdriNsafeeLrellPk.a 30 
                         +Er RR+++N+++ +Lr+++P+  
  TRIDC2BG042120.6  95 ILMERDRRRKLNEKLYTLRSVVPNiT 120
                       579********************844 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
QSNRTEKSSS QRRIRGKKED MDPDMGENFA YYWETQRYLE SEELVDSIFV GATEDAISYY  60
DSSSPDGSHS SSTPMGSALP GAGMGMDGTG ANKNILMERD RRRKLNEKLY TLRSVVPNIT  120
KVSASISAGI AGTQQHLDRR GDGFNGQCLV VADGQGLDHQ GRDRVHPAAA GRGAADGG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11219RRIRGKKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29930.42e-12bHLH family protein