PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG044040.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CAMTA

Protein Properties

Length: 994aa MW: 110664 Da PI: 5.5794

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG044040.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	127.4	5.7e-40	12	126	3	117
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptf 94 +e k+rwlk++e++ iL n+e+ ++t+e++++p+sg+l+Lynr++ r+frkDGy w++kkdg+tv E+he+LK g + + + + ++p+ TRIDC2BG044040.3 12 REaKSRWLKPSEVYYILLNHEQLQITHEPPNKPPSGALFLYNRRVNRFFRKDGYAWRRKKDGRTVGEAHERLKRGC-RLSGLVGSLGVQVPSN 103 4559*******************************************************************765.33344557799* PP CG-1 95 qrrcywlLeeelekivlvhylev 117 +rrc+w+Le ++++ivlv+y+ev TRIDC2BG044040.3 104 NRRCFWMLEPAYDHIVLVQYREV 126 *******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 994 aa Download sequence
PRLGFDINVL LREAKSRWLK PSEVYYILLN HEQLQITHEP PNKPPSGALF LYNRRVNRFF 60 RKDGYAWRRK KDGRTVGEAH ERLKRGCRLS GLVGSLGVQV PSNNRRCFWM LEPAYDHIVL 120 VQYREVAEGR YYSTLSNGSA GSLSTLSYPN DIHGKHGSTS DFSEGNESHQ SSVTEVSSYS 180 ANKEENHDSG VLLSIPELQQ STVMGIPELD QSSLERSSEF CMVNNNDSTN TSGLNQALKS 240 IAEQLSLGDD DYIYINQARS LDFTTNTEAA DVQGNQTSNS LGDDEANQIR PEGAHGVGRG 300 ISSSWENVLQ SDLGLPASST YQFGAHYQQS SEYQPPGGLD SSNLQLQISA AKRFLLGSED 360 PIDSPSYIPR DEGINGINTL SAHDSSLESC LNPDWQRTTP VTLQSSLYQS NSCGYEISEF 420 FDNGQFEPSS EEDTRLTVKQ KQQFSIREIS PEWAFCYEVT KVIITGDFLC DPSNICWAVM 480 FGDTEVPVEI VQPGVLRCHT PLHSAGKLTL CITTGNRKVC SEIKDFEFRA KSTASSFIDF 540 APSSMKSTEE LSLLAKFARI LLCDNGSSAA SGDDPQPGQS PKLKMNEDNW QRLINELDVG 600 CENPLSRVDW IMEELLKSKL QQWLSLRLQG DDGTCSLSKN EQGIIHLISA LGYDWALSSV 660 LSAGVGINLR DSNGWTALHW AAYYGREKMV AALLAAGASA PAVTDPTAQD PVGKSAAFLA 720 SEQGHVGLAG YLSEVALTSY LASLTIEESG ISDGLAAIEA ERAVESISQR SAQLHGGTED 780 ELSLKDSLAA VRNAAQAAAR IQNAFRAFSF RRRQHKDARL KDEYGMTQED IDELAAASRL 840 YYQHHVSNGQ FCDKAAVSIQ KKYRGWKGRK NFLHMRRNVV KIQAHVRGHQ VRKKYKTFVS 900 TVSVLEKVIL RWRRKGHGLR GFRAEQSVMI EAEEGEEEDD DDFDDDEAVK IFRRQKVDES 960 VKESVSRVLS MVDSPEARMQ YRRMLEEFRQ MNSK

Sequence ? help Back to Top

Protein Sequence Length: 994 aa Download sequence

PRLGFDINVL LREAKSRWLK PSEVYYILLN HEQLQITHEP PNKPPSGALF LYNRRVNRFF  60
RKDGYAWRRK KDGRTVGEAH ERLKRGCRLS GLVGSLGVQV PSNNRRCFWM LEPAYDHIVL  120
VQYREVAEGR YYSTLSNGSA GSLSTLSYPN DIHGKHGSTS DFSEGNESHQ SSVTEVSSYS  180
ANKEENHDSG VLLSIPELQQ STVMGIPELD QSSLERSSEF CMVNNNDSTN TSGLNQALKS  240
IAEQLSLGDD DYIYINQARS LDFTTNTEAA DVQGNQTSNS LGDDEANQIR PEGAHGVGRG  300
ISSSWENVLQ SDLGLPASST YQFGAHYQQS SEYQPPGGLD SSNLQLQISA AKRFLLGSED  360
PIDSPSYIPR DEGINGINTL SAHDSSLESC LNPDWQRTTP VTLQSSLYQS NSCGYEISEF  420
FDNGQFEPSS EEDTRLTVKQ KQQFSIREIS PEWAFCYEVT KVIITGDFLC DPSNICWAVM  480
FGDTEVPVEI VQPGVLRCHT PLHSAGKLTL CITTGNRKVC SEIKDFEFRA KSTASSFIDF  540
APSSMKSTEE LSLLAKFARI LLCDNGSSAA SGDDPQPGQS PKLKMNEDNW QRLINELDVG  600
CENPLSRVDW IMEELLKSKL QQWLSLRLQG DDGTCSLSKN EQGIIHLISA LGYDWALSSV  660
LSAGVGINLR DSNGWTALHW AAYYGREKMV AALLAAGASA PAVTDPTAQD PVGKSAAFLA  720
SEQGHVGLAG YLSEVALTSY LASLTIEESG ISDGLAAIEA ERAVESISQR SAQLHGGTED  780
ELSLKDSLAA VRNAAQAAAR IQNAFRAFSF RRRQHKDARL KDEYGMTQED IDELAAASRL  840
YYQHHVSNGQ FCDKAAVSIQ KKYRGWKGRK NFLHMRRNVV KIQAHVRGHQ VRKKYKTFVS  900
TVSVLEKVIL RWRRKGHGLR GFRAEQSVMI EAEEGEEEDD DDFDDDEAVK IFRRQKVDES  960
VKESVSRVLS MVDSPEARMQ YRRMLEEFRQ MNSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	1e-122	CAMTA family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG044040.3