PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG047330.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 161aa    MW: 18493.4 Da    PI: 8.2542
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG047330.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.71.5e-06105126326
                       S---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH   3 telCrffartGtCkyGdrCkFaHg 26 
                        e Cr++++   C++ ++C+FaH+
  TRIDC2BG047330.5 105 VEVCRDYLK-KMCNR-ESCRFAHP 126
                       589******.*****.*******9 PP
2zf-CCCH21.73.6e-07136158226
                       -S---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHg 26 
                       k e Cr+f r G+C + ++C+F H+
  TRIDC2BG047330.5 136 KVEVCRDFKR-GECTR-PTCRFYHP 158
                       89********.*****.*******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
EVCRDFARGR CSRSANECRF LHHSSVQECA IVCQDFLRGR CDRISCRYTH VIAQPMLPPP  60
MRDVPMQMPY PEMVYMPPPP PPLGVPMMAP PLSPPRGFAD NKSTVEVCRD YLKKMCNRES  120
CRFAHPDSQT EVAHDKVEVC RDFKRGECTR PTCRFYHPSS S