PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG047330.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 238aa    MW: 27351.4 Da    PI: 8.4096
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG047330.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH18.92.6e-06182203326
                       S---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH   3 telCrffartGtCkyGdrCkFaHg 26 
                        e Cr++++   C++ ++C+FaH+
  TRIDC2BG047330.7 182 VEVCRDYLK-KMCNR-ESCRFAHP 203
                       589******.*****.*******9 PP
2zf-CCCH20.96.3e-07213235226
                       -S---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHg 26 
                       k e Cr+f r G+C + ++C+F H+
  TRIDC2BG047330.7 213 KVEVCRDFKR-GECTR-PTCRFYHP 235
                       89********.*****.*******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
EACRDYLRDR CTRSDLECKY AHPHQSVSVD RDSKVTACAD SLRNNCFRGR TCRYYHPPPH  60
IQESLLRSIG LDVPPVKTVC RDFARGRCSR SANECRFLHH SSVQECAIVC QDFLRGRCDR  120
ISCRYTHVIA QPMLPPPMRD VPMQMPYPEM VYMPPPPPPL GVPMMAPPLS PPRGFADNKS  180
TVEVCRDYLK KMCNRESCRF AHPDSQTEVA HDKVEVCRDF KRGECTRPTC RFYHPSSS