PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG047330.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 223aa    MW: 25350.3 Da    PI: 8.5483
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG047330.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH192.4e-06167188326
                       S---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH   3 telCrffartGtCkyGdrCkFaHg 26 
                        e Cr++++   C++ ++C+FaH+
  TRIDC2BG047330.9 167 VEVCRDYLK-KMCNR-ESCRFAHP 188
                       589******.*****.*******9 PP
2zf-CCCH215.8e-07198220226
                       -S---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHg 26 
                       k e Cr+f r G+C + ++C+F H+
  TRIDC2BG047330.9 198 KVEVCRDFKR-GECTR-PTCRFYHP 220
                       89********.*****.*******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
RVQVCAPAPI RFRRPGLQGD RMRRFAEEQL LPGQNLPLLP PASSYTGVLA EINWFGRPTG  60
EDGVCRDFAR GRCSRSANEC RFLHHSSVQE CAIVCQDFLR GRCDRISCRY THVIAQPMLP  120
PPMRDVPMQM PYPEMVYMPP PPPPLGVPMM APPLSPPRGF ADNKSTVEVC RDYLKKMCNR  180
ESCRFAHPDS QTEVAHDKVE VCRDFKRGEC TRPTCRFYHP SSS