PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG047610.17
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 250aa    MW: 27831.8 Da    PI: 10.702
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG047610.17genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.61.6e-1111565299
                       .EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                 B3 52 yrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                       + ++++r++lt+GW+ Fv++++L +gD ++F   + +++el+v+v+r+
  TRIDC2BG047610.17 11 FGGQPRRHLLTTGWSVFVSSKRLVAGDAFIFL--RGENGELRVGVRRH 56
                       467899**************************..449999******96 PP
2Auxin_resp102.55.5e-3481166183
         Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvs...dldpvrWpnSkWrsLk 83 
                        a+ha+st++ F+v+Y+Pr+s+seFvv+v+k+++a k+++svGmRfkm+fe++++ err+sGt++g+    +++++ W +S W+sLk
  TRIDC2BG047610.17  81 ASHAISTGTLFSVFYKPRTSQSEFVVSVNKYLEAKKQNISVGMRFKMKFEGDEALERRFSGTIIGIGstpTMSTSPWADSDWKSLK 166
                        789*************************************************************997222578889********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MELTGIFVTY FGGQPRRHLL TTGWSVFVSS KRLVAGDAFI FLRGENGELR VGVRRHMRQV  60
NNMPSSVISS HSMHLGVLAT ASHAISTGTL FSVFYKPRTS QSEFVVSVNK YLEAKKQNIS  120
VGMRFKMKFE GDEALERRFS GTIIGIGSTP TMSTSPWADS DWKSLKVQWD EPSSILRPDR  180
VSPWELEPLD AANPQPPQPP LRNKRPRLPA SSSVVPELAP KFGLWKSPAE PSQTLSFSEP  240
QQARGLFTNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59750.41e-113ARF family protein