PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG047770.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 428aa    MW: 49145.5 Da    PI: 7.7573
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG047770.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR158.32.5e-1849142290
              FAR1   2 fYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHel 89 
                        Y+ +Ak++GFs+r+++++ +    +  t+r fvC + g++  +  +   k++r+r+++r+gC+a l++ ++      +w+vt ++++HnHel
  TRIDC2BG047770.4  49 LYSGFAKQCGFSIRRHRTEGKdGVGKGLTRRYFVCHRAGNTPAKPFDdGAKQQRNRKSSRCGCQAYLRIGRDAgagGLEWRVTGFSNHHNHEL 141
                       79************9998877356667999*********998887664678899*****************99877789*************9 PP

              FAR1  90 a 90 
                        
  TRIDC2BG047770.4 142 L 142
                       6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    
MERPSSGEEG ERDSPNERRI SLETAAAEAD DSVPYIGQRF PTHEAAYELY SGFAKQCGFS  60
IRRHRTEGKD GVGKGLTRRY FVCHRAGNTP AKPFDDGAKQ QRNRKSSRCG CQAYLRIGRD  120
AGAGGLEWRV TGFSNHHNHE LLRQDEVRFL PAYRVISDSD RDRILVFAKS GISVQQMMRI  180
MELEKCVQPG NLPFTDKDVR NLIHSFRRFD QEDEIVDLLK MCRNVKEKDP NFKYDYTKDA  240
SNCLENIAWS YASSIQSYEV FGDAVVFDTT HRLTSIDMTL GIWIGMNNHG MPCFFSCALL  300
REGNLQSFTW ALQVFLNFMN RKAPQTILTD QNMYLKEAVQ KELPNTKHAL SIGLIALRFP  360
SWFNAVLGRH YNDWENEFYR LNNMESTMDF DLGWSDMVSC YGLHGNRHIA SLFASRKLWA  420
SPYLGGHF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10240.10.0FAR1 family protein