PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG050060.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 216aa    MW: 24019.4 Da    PI: 9.5014
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG050060.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1761.1e-54451701128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                       lppGfrFhPtdeel+++yL+kkv++ ++ +  +++ +d++k+ePwdLp+ ++ +ekewyfF+ +d+ky+tg r+nrat+sgyWkatgkdk+++
  TRIDC2BG050060.2  45 LPPGFRFHPTDEELITHYLAKKVADARFAA-LAVSVADLNKCEPWDLPSLARMGEKEWYFFCLKDRKYPTGLRTNRATESGYWKATGKDKDIF 136
                       79*************************999.569999***********8778899************************************** PP

               NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       + +++lvg+kktLvfy+grapkg k+ Wvmheyrl
  TRIDC2BG050060.2 137 R-GKALVGMKKTLVFYTGRAPKGDKSGWVMHEYRL 170
                       *.99*****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
LFSLNNSPSI HPLPIESISS SSAVLKEGQK EVMEHGEQEQ HAMDLPPGFR FHPTDEELIT  60
HYLAKKVADA RFAALAVSVA DLNKCEPWDL PSLARMGEKE WYFFCLKDRK YPTGLRTNRA  120
TESGYWKATG KDKDIFRGKA LVGMKKTLVF YTGRAPKGDK SGWVMHEYRL NAKLHAASTS  180
RGSLSGGRAA SSKVATSFHH ACVYLACDRS YILGHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.17e-80NAC family protein