PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG050060.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 354aa MW: 38022.6 Da PI: 7.1606

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG050060.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	174.3	3.6e-54	13	138	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeel+++yL+kkv++ ++ + +++ +d++k+ePwdLp+ ++ +ekewyfF+ +d+ky+tg r+nrat+sgyWkatgkdk+++ TRIDC2BG050060.5 13 LPPGFRFHPTDEELITHYLAKKVADARFAA-LAVSVADLNKCEPWDLPSLARMGEKEWYFFCLKDRKYPTGLRTNRATESGYWKATGKDKDIF 104 79***********************999.569999*******8778899************************************ PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++lvg+kktLvfy+grapkg k+ Wvmheyrl TRIDC2BG050060.5 105 R-GKALVGMKKTLVFYTGRAPKGDKSGWVMHEYRL 138 .99****************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MEHGEQEQHA MDLPPGFRFH PTDEELITHY LAKKVADARF AALAVSVADL NKCEPWDLPS 60 LARMGEKEWY FFCLKDRKYP TGLRTNRATE SGYWKATGKD KDIFRGKALV GMKKTLVFYT 120 GRAPKGDKSG WVMHEYRLNA KLHAASTSRG SLSGGRAASS KNEWVLCRVF KKSLVGGVVS 180 SAPASSAAKK GGVGMIEEIG SSVADVTPLP PLLDMSGSGA SFVDPAAHVT CFSNNALEAG 240 QFFNPTATGG CATDADHHGL ASSYSPLASF TQYGGQLHHG VSLSLVQLLE SSGYHRGLAD 300 DMAPCGNQQQ PAACKGERER LSASQDTGLT SDVNPEISSS FGQTFDHEPA PWGY

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MEHGEQEQHA MDLPPGFRFH PTDEELITHY LAKKVADARF AALAVSVADL NKCEPWDLPS  60
LARMGEKEWY FFCLKDRKYP TGLRTNRATE SGYWKATGKD KDIFRGKALV GMKKTLVFYT  120
GRAPKGDKSG WVMHEYRLNA KLHAASTSRG SLSGGRAASS KNEWVLCRVF KKSLVGGVVS  180
SAPASSAAKK GGVGMIEEIG SSVADVTPLP PLLDMSGSGA SFVDPAAHVT CFSNNALEAG  240
QFFNPTATGG CATDADHHGL ASSYSPLASF TQYGGQLHHG VSLSLVQLLE SSGYHRGLAD  300
DMAPCGNQQQ PAACKGERER LSASQDTGLT SDVNPEISSS FGQTFDHEPA PWGY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	5e-87	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG050060.5