PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG050060.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 346aa MW: 38454.2 Da PI: 11.7499

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG050060.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	174.3	3.5e-54	10	135	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeel+++yL+kkv++ ++ + +++ +d++k+ePwdLp+ ++ +ekewyfF+ +d+ky+tg r+nrat+sgyWkatgkdk+++ TRIDC2BG050060.8 10 LPPGFRFHPTDEELITHYLAKKVADARFAA-LAVSVADLNKCEPWDLPSLARMGEKEWYFFCLKDRKYPTGLRTNRATESGYWKATGKDKDIF 101 79***********************999.569999*******8778899************************************ PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++lvg+kktLvfy+grapkg k+ Wvmheyrl TRIDC2BG050060.8 102 R-GKALVGMKKTLVFYTGRAPKGDKSGWVMHEYRL 135 .99****************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
GEQEQHAMDL PPGFRFHPTD EELITHYLAK KVADARFAAL AVSVADLNKC EPWDLPSLAR 60 MGEKEWYFFC LKDRKYPTGL RTNRATESGY WKATGKDKDI FRGKALVGMK KTLVFYTGRA 120 PKGDKSGWVM HEYRLNAKLH AAITTGRPVL FVERVGAVQG VQEEPCRRRS VVGAGVVRSK 180 ERRRGDDRGD RVLRGRCHPA PSAPGHVRLR RLLRRPGGAR DLLLQQRAGG GSVLQPDGDG 240 RLRHGRGPPR ASLVILPVGK LHAVRGAAAP RREPEPGAAP GEQRVPPWSR RRHGAVRQPA 300 AAGRVQGRAG EAERVAGHRA HLRREPRDLF FLRPNVRPRA RAVGLL

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

GEQEQHAMDL PPGFRFHPTD EELITHYLAK KVADARFAAL AVSVADLNKC EPWDLPSLAR  60
MGEKEWYFFC LKDRKYPTGL RTNRATESGY WKATGKDKDI FRGKALVGMK KTLVFYTGRA  120
PKGDKSGWVM HEYRLNAKLH AAITTGRPVL FVERVGAVQG VQEEPCRRRS VVGAGVVRSK  180
ERRRGDDRGD RVLRGRCHPA PSAPGHVRLR RLLRRPGGAR DLLLQQRAGG GSVLQPDGDG  240
RLRHGRGPPR ASLVILPVGK LHAVRGAAAP RREPEPGAAP GEQRVPPWSR RRHGAVRQPA  300
AAGRVQGRAG EAERVAGHRA HLRREPRDLF FLRPNVRPRA RAVGLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	6e-78	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG050060.8