PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG051830.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 388aa MW: 43074.6 Da PI: 5.7112

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG051830.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	87.1	3.3e-27	89	228	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk..leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.........t 78 lp G++F+Ptd +l+ +L+ k+ + + ++++i++++ i++++P++Lp vk++ + +fF+k ++y g+rk+r+ TRIDC2BG051830.1 89 LPTGVKFDPTDLQLL-GHLEGKIGRAVshVLIDDFIPTIEmpegICYTHPENLP-GVKSDGTASHFFHKICNAYDVGTRKRRKisnsdcnvcD 179 699**********.889998844223344555533344******.77889999***************86777777655 PP NAM 79 ksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +W++tgk++++l+++g +g kk++v+ kg a+ ekt+W+mh+y+l TRIDC2BG051830.1 180 EHLRWHKTGKSRHILDNNGDIKGWKKIMVLRKGGAKA-EKTNWTMHQYHL 228 5778**********************9887766.8*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
SLAQNFPRPS SSPPPRMLVR SLLAHHSAPT VADLRRRSRA PMEEPFIVTG KIIAMMVRNG 60 ELLPEAGMEC PKCEHRIDNS DVSSQWPGLP TGVKFDPTDL QLLGHLEGKI GRAVSHVLID 120 DFIPTIEMPE GICYTHPENL PGVKSDGTAS HFFHKICNAY DVGTRKRRKI SNSDCNVCDE 180 HLRWHKTGKS RHILDNNGDI KGWKKIMVLR KGGAKAEKTN WTMHQYHLGV DENEKDGELV 240 VCKVFFQLPS EKAGQSVMFA VNEESDSFAV KIDPTTPMTY PPQPPRPDSS PFETEQNQEE 300 EEFRLSAVRG AAEWLAGTSS YAVDDAALPG LDEHPSRGRT PDAAYPEKQH LPLVDTDALQ 360 EFPEPGTPPD FSALADLPIG SLDSFTWL

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

SLAQNFPRPS SSPPPRMLVR SLLAHHSAPT VADLRRRSRA PMEEPFIVTG KIIAMMVRNG  60
ELLPEAGMEC PKCEHRIDNS DVSSQWPGLP TGVKFDPTDL QLLGHLEGKI GRAVSHVLID  120
DFIPTIEMPE GICYTHPENL PGVKSDGTAS HFFHKICNAY DVGTRKRRKI SNSDCNVCDE  180
HLRWHKTGKS RHILDNNGDI KGWKKIMVLR KGGAKAEKTN WTMHQYHLGV DENEKDGELV  240
VCKVFFQLPS EKAGQSVMFA VNEESDSFAV KIDPTTPMTY PPQPPRPDSS PFETEQNQEE  300
EEFRLSAVRG AAEWLAGTSS YAVDDAALPG LDEHPSRGRT PDAAYPEKQH LPLVDTDALQ  360
EFPEPGTPPD FSALADLPIG SLDSFTWL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	9e-69	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG051830.1