PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG051840.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 372aa MW: 41503.8 Da PI: 5.081

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG051840.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	93.5	3.3e-29	64	207	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....lelee.vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.........t 78 lp+G++F+Ptd el+ e+L+ kv + ++ + +ike+ +i++++P++Lp +k + + +fF+k +++y gkrk+r+ TRIDC2BG051840.3 64 LPAGVKFDPTDLELL-EHLEGKVGRVAshvlIDDFIpTIKEAqGICYTHPENLP-GIKMDGSTGHFFHKVSNAYVVGKRKRRKisnsdhtvcD 154 799**********.999998855453333335888878******.666778899**************86777776654 PP NAM 79 ksgyWkatgkdkevlskkgelvglkktLvfy...kgrapkgektdWvmheyrl 128 ++ +W++tgk++++l+++g +g kk+Lv+y ++ k+ekt+W mh+y+l TRIDC2BG051840.3 155 ENLRWHKTGKSRSILDNNGVIKGWKKILVLYigyRKGGGKTEKTNWRMHQYHL 207 5788***********************65544555668*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
VAAQPRRPAM AEFFRSLIVT AKTIATMIIH PSLCKIEELL AWMECPNCKY RIDNTDVLSQ 60 WPGLPAGVKF DPTDLELLEH LEGKVGRVAS HVLIDDFIPT IKEAQGICYT HPENLPGIKM 120 DGSTGHFFHK VSNAYVVGKR KRRKISNSDH TVCDENLRWH KTGKSRSILD NNGVIKGWKK 180 ILVLYIGYRK GGGKTEKTNW RMHQYHLGVD QDEKQEELVV SKVFYQVQSM NAGQSLVCGV 240 NEEFDSFAGE DDPTTPMTYP LQTRYPNGSP SGTEQNQEEG ESRVSTVREA GEWLAGSSSH 300 AMDDAAVSGL DEHLSHGRIP EEALLGFPDL GMPPDVSLLT DMQLGSQDSM EMWLVSVLTE 360 DEGVFEAAEQ RE

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

VAAQPRRPAM AEFFRSLIVT AKTIATMIIH PSLCKIEELL AWMECPNCKY RIDNTDVLSQ  60
WPGLPAGVKF DPTDLELLEH LEGKVGRVAS HVLIDDFIPT IKEAQGICYT HPENLPGIKM  120
DGSTGHFFHK VSNAYVVGKR KRRKISNSDH TVCDENLRWH KTGKSRSILD NNGVIKGWKK  180
ILVLYIGYRK GGGKTEKTNW RMHQYHLGVD QDEKQEELVV SKVFYQVQSM NAGQSLVCGV  240
NEEFDSFAGE DDPTTPMTYP LQTRYPNGSP SGTEQNQEEG ESRVSTVREA GEWLAGSSSH  300
AMDDAAVSGL DEHLSHGRIP EEALLGFPDL GMPPDVSLLT DMQLGSQDSM EMWLVSVLTE  360
DEGVFEAAEQ RE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	139	144	KRKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	3e-70	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG051840.3