PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG051860.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 284aa MW: 31586.1 Da PI: 6.3411

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG051860.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	43.8	8.1e-14	2	85	58	128
NAM 58 wyfFskrdkkyatgkrknra.........tksgyWkatgkdkevlskkgelvglkktLvfykgrapkge....ktdWvmheyrl 128 +fF++ +++y g+rk+r+ + +W++tgk+k++ +++g +g kk+Lv+ ++++g +t+W+mh+y+l TRIDC2BG051860.1 2 SHFFHQISNAYDVGRRKRRKisnsghavcDVHFRWHKTGKSKQISDNNGVIKGWKKILVLRMRSRKDGItshkNTNWTMHQYHL 85 69***************645555444322456**********************95544444222339******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 284 aa Download sequence
KSHFFHQISN AYDVGRRKRR KISNSGHAVC DVHFRWHKTG KSKQISDNNG VIKGWKKILV 60 LRMRSRKDGI TSHKNTNWTM HQYHLGVDQH EKHGELVVSK VFHQSEKDEK PVMCPVNEES 120 DPFAGEIDPT TPMTYPPQPR PPNSSQSRTE QNQEEHAALS GPDERPSRGA TPDSVYPEMQ 180 PFSPGLDALQ GLPDPRTPPG FSHMASWFAG TSSHSNALED APLFGLDECL PHGGTLDAAY 240 PNPEGQALPL DAEALQGFPD LVTPPDIFPD LQFGSQDILW GEGF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	16	43	RRKRRKISNSGHAVCDVHFRWHKTGKSK
2	17	44	RRKRRKISNSGHAVCDVHFRWHKTGKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28500.1	3e-24	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG051860.1