PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG052850.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 191aa    MW: 20745.3 Da    PI: 10.0557
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG052850.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix91.68e-2944131286
          trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt...sessstcpyfdqle 86 
                       W ++e+l Li++rrem+++++++k++k+lWe++s+kmre+gf rsp++C++kw+nl k++kk + ++++ +    + s +++y+++++
  TRIDC2BG052850.2  44 WVQDETLSLIALRREMDNHFNTSKSNKHLWEAISAKMREQGFDRSPTMCTDKWRNLLKEFKKARSHARSSAgagGNGSAKMAYYKEID 131
                       *****************************************************************99987433456778899999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MLLAGPQPPT PPLLLPESSG EDGGAHDHDS SSRASAPKKR AETWVQDETL SLIALRREMD  60
NHFNTSKSNK HLWEAISAKM REQGFDRSPT MCTDKWRNLL KEFKKARSHA RSSAGAGGNG  120
SAKMAYYKEI DDLLKRRGKA AASPAGSGGG GGAAKSPTPT SKIESYLQFA DKGFEDANIP  180
FGPLWFVKTR D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13450.33e-46Trihelix family protein