PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG054780.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 104aa    MW: 12059.9 Da    PI: 9.0947
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG054780.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR124.21.1e-074198168
              FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkv 68
                      +fYn Y+ e+GF vr +ks+ + r +   +++  C +  k+          r+++ ++r+gC+a++++
  TRIDC2BG054780.2 41 EFYNLYSWECGFVVRLAKSRMNVRRK-RCMQEILCACADKP---------MRKNSRSSRCGCEAMIRL 98
                      6*****************99995555.34445555554444.........45667799*******987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 104 aa     Download sequence    
MNPDRKTTLE LSVRAYAETR HGPVVNPETG TAFDSLDEAY EFYNLYSWEC GFVVRLAKSR  60
MNVRRKRCMQ EILCACADKP MRKNSRSSRC GCEAMIRLLR PNFT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80010.11e-10FAR1 family protein