PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG055380.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-YB

Protein Properties

Length: 262aa MW: 27773.8 Da PI: 6.6245

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG055380.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	179.2	3.6e-56	56	151	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 +eqdrflPianvsrimk++lPanakisk+aketvqecvsefisfvt+easdkcqrekrktingddllwa++tlGfe yv+plk+yl++yre+e TRIDC2BG055380.1 56 KEQDRFLPIANVSRIMKRTLPANAKISKEAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEVYVAPLKAYLNRYREVE 148 89******************************************************************************************* PP NF-YB 95 gek 97 gek TRIDC2BG055380.1 149 GEK 151 *97 PP

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence
YQYYCYCCGL DIFLSKRGAA SVDMKSRKSY GQQQSHLLSP VGSPSSDNGG GDSPAKEQDR 60 FLPIANVSRI MKRTLPANAK ISKEAKETVQ ECVSEFISFV TGEASDKCQR EKRKTINGDD 120 LLWAMTTLGF EVYVAPLKAY LNRYREVEGE KAAVVGGSRH GDDDAHSSLS AAGDALAPQY 180 PHGAGDRGVQ DGDVGGHDAH VGLMMGVNMG FSPGTGTTFY AAPGAAHGRR AYGGGEGARG 240 IDFEGAFGGD RGKNGVGGER EF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14540.1	4e-62	NF-YB family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG055380.1