PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG055710.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 258aa MW: 28974.4 Da PI: 6.5101

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG055710.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.3	4.3e-19	21	68	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTt+Ed+ll+d v+q+G g+W+++++ g++R++k+c++rw +yl TRIDC2BG055710.2 21 KGPWTTQEDKLLLDHVAQHGEGRWNSVSKLTGLKRSGKSCRLRWVNYL 68 79********************************************97 PP
2	Myb_DNA-binding	54	3.8e-17	74	118	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T++E+ +v+++ ++G++ W+tIar ++ gRt++++k++w+++ TRIDC2BG055710.2 74 RGKMTPQEESTIVQLHSLWGNR-WSTIARSLP-GRTDNEIKNYWRTH 118 89******************.*****.**********87 PP

Sequence ? help Back to Top
Protein Sequence Length: 258 aa Download sequence
MAEAEGQLAA CWGKQDDEWR KGPWTTQEDK LLLDHVAQHG EGRWNSVSKL TGLKRSGKSC 60 RLRWVNYLRP DLKRGKMTPQ EESTIVQLHS LWGNRWSTIA RSLPGRTDNE IKNYWRTHYK 120 KGKPSKNIER ARARFLMQRR EMQQQQQQQK LLLGQVKDVE LPGATVSDDV DEKMDRAVGP 180 AATALADHGH EELIMQDVLD FLCPMSCALL HSAGQTGSCG ASTSEEYGST EDDGATWGSL 240 WNLEDVAHDG DGGACALW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13480.1	1e-62	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG055710.2