PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG058800.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 425aa    MW: 45711.3 Da    PI: 6.8318
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG058800.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.12.8e-19343377135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       Cs+Cg+ kTp+WR gp+g ktLCnaCG++y++ +l
  TRIDC2BG058800.2 343 CSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRL 377
                       *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    
MLHQTLIPSC LAFSASASPD PLPFASNATA AAPAAATHLR SSAMPSYAHH HSSLDERMDA  60
LKGSSRQEET PDEAAAEAPA AWGFAERDGF SVEDLLDLEE FCEPDKDGAD EPQEAPAADV  120
KEEKLNDGPQ QPVVSYELAP PAPPAPEIVD LPAHDVEEEL EWVSRIMDDS LSELPPQPAP  180
SASMMASLAA RPPQRRLPLP QRHPQDGAYR ALPSMSDPMR TPTICALSTE ALVPIKAKRS  240
KRSRASGWSL SGPTPDSTSS SSTTTTSSCS SSASFSPYFL MDSTHFGASE LMEEYNILPP  300
PPKKSKHGKS SKQKAKKRGR KPKNLPAHPS SAMEAATQSD RRCSHCGVQK TPQWRAGPEG  360
AKTLCNACGV RYKSGRLLPE YRPACSPTYV SSVHSNSHRK VLEMRRKKED GPLTVTATAP  420
AVASF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.27e-40GATA family protein