PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG058800.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 259aa    MW: 27977.8 Da    PI: 10.6662
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG058800.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA611.4e-19177211135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       Cs+Cg+ kTp+WR gp+g ktLCnaCG++y++ +l
  TRIDC2BG058800.4 177 CSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRL 211
                       *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MDDSLSELPP QPAPSASMMA SLAARPPQRR LPLPQRHPQD GAYRALPSMS DPMRTPTICA  60
LSTEALVPIK AKRSKRSRAS GWSLSGPTPD STSSSSTTTT SSCSSSASFS PYFLMDSTHF  120
GASELMEEYN ILPPPPKKSK HGKSSKQKAK KRGRKPKNLP AHPSSAMEAA TQSDRRCSHC  180
GVQKTPQWRA GPEGAKTLCN ACGVRYKSGR LLPEYRPACS PTYVSSVHSN SHRKVLEMRR  240
KKEDGPLTVT ATAPAVASF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.23e-41GATA family protein