PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG058800.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 223aa    MW: 24082.3 Da    PI: 10.5969
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG058800.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA61.31.2e-19141175135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       Cs+Cg+ kTp+WR gp+g ktLCnaCG++y++ +l
  TRIDC2BG058800.5 141 CSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRL 175
                       *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
HPQDGAYRAL PSMSDPMRTP TICALSTEAL VPIKAKRSKR SRASGWSLSG PTPDSTSSSS  60
TTTTSSCSSS ASFSPYFLMD STHFGASELM EEYNILPPPP KKSKHGKSSK QKAKKRGRKP  120
KNLPAHPSSA MEAATQSDRR CSHCGVQKTP QWRAGPEGAK TLCNACGVRY KSGRLLPEYR  180
PACSPTYVSS VHSNSHRKVL EMRRKKEDGP LTVTATAPAV ASF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.23e-41GATA family protein