PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG058830.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

DBB

Protein Properties

Length: 241aa MW: 25820.9 Da PI: 6.4854

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG058830.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.3	2.6e-07	4	46	5	41
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 C+ +e + ++ fC ++ lC+ C H+ H++ + TRIDC2BG058830.1 4 QCDVCEAEAASVFCCADEAALCDACDRRVHRAnklagkHRRLS 46 7*****************************7688888888765 PP
2	zf-B_box	26.5	1.4e-08	62	94	2	34
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeH 34 +++ C+ ++ek+ lfC++++ lC++C ++ H TRIDC2BG058830.1 62 KPPLCDICQEKRGFLFCKEDRAILCRECDVQVH 94 7899**************************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
MKVQCDVCEA EAASVFCCAD EAALCDACDR RVHRANKLAG KHRRLSLLHP SPSSPSSSPS 60 SKPPLCDICQ EKRGFLFCKE DRAILCRECD VQVHTVSELT RRHGRFLLTG VRVSSAPAES 120 PAPSGQEEEE GNSTSPCNAD SCSGDASGTA SASATANDGS SISEYLTKTL PGWHVEDFLL 180 DDAAASAAVA VSSNKPYQVS SKQVVLGNQR YLASTMNTRM LPVLPIFLSS QSFRQFVCSN 240 Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39070.1	8e-28	DBB family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG058830.1