PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG059000.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 228aa    MW: 25116.2 Da    PI: 10.0461
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG059000.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix112.52.5e-3537122187
          trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                       rW+k ev+aLi++r +m++r++++  k+plWee+s+ mr+ g++r++k+Ckekwen+nk++kk+ke++k+r +e+s+tcpyf+qlea
  TRIDC2BG059000.5  37 RWPKTEVHALIQLRMDMDNRYQENGPKGPLWEEISAGMRRLGYSRNSKRCKEKWENINKYFKKVKESNKRR-PEDSKTCPYFHQLEA 122
                       8********************************************************************97.99***********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
TSAGLSLALV PVATEQHVVE AAGLGGGESG GGPSSSRWPK TEVHALIQLR MDMDNRYQEN  60
GPKGPLWEEI SAGMRRLGYS RNSKRCKEKW ENINKYFKKV KESNKRRPED SKTCPYFHQL  120
EAIYRKKHNG SGSSGAAANN AVVSVPAVAE HQNLNRHEIE IEGKKINDTD KRNNGGVGAA  180
QVPTSNGQTT PTTATFDLGV KKVIAHTIFT LQPSVFELDQ SRSRWMFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.15e-53Trihelix family protein