PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG059050.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HD-ZIP
Protein Properties Length: 262aa    MW: 29320.8 Da    PI: 4.9561
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG059050.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.81e-1962115456
                       -SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox   4 RttftkeqleeLeelFek.nrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                       +++ft+eq++ Le++F+  + ++  +e++eLA++lgL+ rqV +WFqN+Ra+++
  TRIDC2BG059050.2  62 KRRFTEEQIRSLESMFHAhHAKLEPREKAELARELGLQPRQVAIWFQNKRARWR 115
                       458**************9899********************************9 PP
2HD-ZIP_I/II124.74.3e-4060153193
       HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeee.kLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                       e+krr+++eq+++LE++F++++ kLep++K+elareLglqprqva+WFqn+RAR+++kqlE+d++aL++ ydal+++ e+L++e+ +L+++l+
  TRIDC2BG059050.2  60 ERKRRFTEEQIRSLESMFHAHHaKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQLEHDFAALRADYDALHSRVESLKQEKLALAAQLH 152
                       69******************999*******************************************************************998 PP

       HD-ZIP_I/II  93 e 93 
                       e
  TRIDC2BG059050.2 153 E 153
                       6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MDYHQQHQQQ HQFLMPPPAS LPAQQQQLCA PMMGIDMDMD MDMDEQLCFM GRGGVGRGAE  60
RKRRFTEEQI RSLESMFHAH HAKLEPREKA ELARELGLQP RQVAIWFQNK RARWRSKQLE  120
HDFAALRADY DALHSRVESL KQEKLALAAQ LHELSERLRQ RDGGSGGAAT ATASSSSCNG  180
GGQELDDDKR NVVAGCVDVE PPESCVLGGT TCATPADVSV SVESECDDHL HYDGAVFPES  240
FCATPELWEP WPWPPVEWNA VA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.26e-30HD-ZIP family protein