PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG059050.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HD-ZIP
Protein Properties Length: 232aa    MW: 26862.8 Da    PI: 12.2487
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG059050.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.18.4e-201972456
                      -SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox  4 RttftkeqleeLeelFek.nrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                      +++ft+eq++ Le++F+  + ++  +e++eLA++lgL+ rqV +WFqN+Ra+++
  TRIDC2BG059050.3 19 KRRFTEEQIRSLESMFHAhHAKLEPREKAELARELGLQPRQVAIWFQNKRARWR 72
                      458**************9899********************************9 PP
2HD-ZIP_I/II121.54.3e-3917104187
       HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeee.kLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeL 87 
                       e+krr+++eq+++LE++F++++ kLep++K+elareLglqprqva+WFqn+RAR+++kqlE+d++aL++ ydal+++ e+L++e+ ++
  TRIDC2BG059050.3  17 ERKRRFTEEQIRSLESMFHAHHaKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQLEHDFAALRADYDALHSRVESLKQEKLAV 104
                       69******************999************************************************************98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
DEQLCFMGRG GVGRGAERKR RFTEEQIRSL ESMFHAHHAK LEPREKAELA RELGLQPRQV  60
AIWFQNKRAR WRSKQLEHDF AALRADYDAL HSRVESLKQE KLAVCAVARA EREAEAEGRR  120
QRWRGDRHRQ QQQLQRRRAG AGRRQEERRR RVRRRRAPRE LRARRDDVRH AGGRLGVGGV  180
GVRRPPPLRR GGLPGVLLRH ARAVGAVAVA ARRVERGGLK PCSVYSLRLK MS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1136156RRRAGAGRRQEERRRRVRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.12e-33HD-ZIP family protein