PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG059510.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 440aa    MW: 47915.8 Da    PI: 7.9041
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG059510.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA44.42.3e-14741135
              GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                      C +Cg+t+TplWR+gp  ++ LCnaCG ++r kg+
  TRIDC2BG059510.1  7 CCHCGVTSTPLWRNGPPHKPVLCNACGSRWRTKGS 41
                      99**************88888***********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    
MGKEGPCCHC GVTSTPLWRN GPPHKPVLCN ACGSRWRTKG SLENYTPMHS RDDIDADQPR  60
VSKLKPPTLR LKEQRQLKKK PSHSIRENGA FSDQNFWKMG DADPSRSSSG SALSYSESCA  120
PYGSADASEM GSAQSHAWES LVPSKKRSCV TRTKSSSVDM LVKDLHCIMH EEQLSYLSGS  180
SEEDLIYHSA TPVGSFEIGY GSMLLRSSNS KSVEEDSEAN SVPADNKSYL TSESYSGTAS  240
FVVHSESKGA SNSNASPEKP KWFPVQTHEI AKRGKLHYSK QHTLENVGST LVSVALEGEG  300
TKETGGNENT SALKDLTKST MKPLKRPHES QLQSCPEGTM RIAKKVCKSV AMAPQFKSSF  360
LPKSGGAPFN LLMLPPDKIS MLAPPQYMDN SDQDLLLEVP LNARQPEAEL LCQPFQLSSV  420
TRSSTSADVV ADGEGRLKQP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17570.33e-55GATA family protein