PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG059510.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 318aa    MW: 34674.7 Da    PI: 8.1628
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG059510.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA451.5e-142458135
              GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                      C +Cg+t+TplWR+gp  ++ LCnaCG ++r kg+
  TRIDC2BG059510.5 24 CCHCGVTSTPLWRNGPPHKPVLCNACGSRWRTKGS 58
                      99**************88888***********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
FLRFFLVCSW GARGGGGMGK EGPCCHCGVT STPLWRNGPP HKPVLCNACG SRWRTKGSLE  60
NYTPMHSRDD IDADQPRVSK LKPPTLRLKE QRQLKKKPSH SIRENGAFSD QNFWKMGDAD  120
PSRSSSGSAL SYSESCAPYG SADASEMGSA QSHAWESLVP SKKRSCVTRT KSSSVDMLVK  180
DLHCIMHEEQ LSYLSGSSEE DLIYHSATPV GSFEIGYGSM LLRSSNSKSV EEDSEANSVP  240
ADNKSYLTSE SYSGTASFVV HSESKGASNS NASPEKPKWF PVQTHEIAKR GKLHYSKQHT  300
LENVGSTLVS VALEVSSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17570.31e-52GATA family protein