PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG059950.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 409aa MW: 43741.7 Da PI: 6.5938

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG059950.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	93.4	1.6e-29	105	193	1	85
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 f+kv tpsdv+k++rlv+pk++ae++ +e++ l++ed+ g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F + TRIDC2BG059950.1 105 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldAAANEKGLLLSFEDRGGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 193 89*************************955556888**********************************************854 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MEFTAASSSS RLSKEGEEEE EMEEEEEEGD EASPREIPFM TAMTAAASSS SPTSAASPSS 60 AAASACASGS GSPFRSSDGA GASGSGAGGG AGGGDVEVID KEHLFDKVVT PSDVGKLNRL 120 VIPKQHAEKY FPLDAAANEK GLLLSFEDRG GKLWRFRYSY WNSSQSYVMT KGWSRFVKEK 180 RLDAGDTVSF CRGAAEATRD RLFIDWKRRA ELRDPHRLAR LPMPMPTSSP YGPWGAGPGG 240 FFMPPAPPAT LYEHHRLRQS FDFRSISPAA PQRPQVLYFG SAGIFPHATM PRPQPQPPLH 300 IAVQPSPAVT VGMPMVLDST PLVNSPTAAA KRVRLFGVNL DNPHTHGGES SNDANALSLR 360 MPGWQRPTPF RSLELPQHGA AGAESSAASS PSSSSSSKRE AHSSLDLDL

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MEFTAASSSS RLSKEGEEEE EMEEEEEEGD EASPREIPFM TAMTAAASSS SPTSAASPSS  60
AAASACASGS GSPFRSSDGA GASGSGAGGG AGGGDVEVID KEHLFDKVVT PSDVGKLNRL  120
VIPKQHAEKY FPLDAAANEK GLLLSFEDRG GKLWRFRYSY WNSSQSYVMT KGWSRFVKEK  180
RLDAGDTVSF CRGAAEATRD RLFIDWKRRA ELRDPHRLAR LPMPMPTSSP YGPWGAGPGG  240
FFMPPAPPAT LYEHHRLRQS FDFRSISPAA PQRPQVLYFG SAGIFPHATM PRPQPQPPLH  300
IAVQPSPAVT VGMPMVLDST PLVNSPTAAA KRVRLFGVNL DNPHTHGGES SNDANALSLR  360
MPGWQRPTPF RSLELPQHGA AGAESSAASS PSSSSSSKRE AHSSLDLDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46870.1	4e-65	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG059950.1