PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG060090.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 542aa    MW: 56473.6 Da    PI: 6.3953
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG060090.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS296.85.5e-911755422374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                       ++lL e+A a+++g+le a a La+l+  a+p+gd+ qRl+a+++ AL++r+a       ++ ++++ ++   +e+ +  +l+++++P+++++
  TRIDC2BG060090.1 175 RQLLSEAAAAIADGNLETAAANLATLKRAANPRGDAEQRLVAVMVAALSSRIAP-----TASASSQQLADLCGAEHHTGSQLLHDITPCFRLA 262
                       689**************************************************9.....444555666655689999999************* PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg....skeeleetgerLakfAeelgvpfefnvlva 183
                         +aN aI+eav+g++ +H +Dfdi+ + Q +aL+q La+R+ +   l++T+v +p+s      + +l  +gerL+k+Ae  g++ +f++ ++
  TRIDC2BG060090.1 263 LDAANIAIVEAVAGHRVIHLVDFDINAP-QHAALIQRLADRRVPGTCLQVTAVTDPTSPftqsLAATLPGVGERLKKLAELAGIEYHFRM-IS 353
                       *************************987.99************************9988777667788899*******************.57 PP

              GRAS 184 krledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
                        r  ++e ++L ++pgEalaVnl+++l +++desvs +++rde+L+ v+ l P+vv++veqe++ n++++++rf++a  +y a++d+l+++++
  TRIDC2BG060090.1 354 CRAVEIEASKLGCEPGEALAVNLAFALSHVPDESVSPANPRDELLRRVRALGPQVVTLVEQELNSNTAPLATRFSDAYLHYGAILDALDSTVS 446
                       7889999************************************************************************************** PP

              GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvs 369
                       r+s +r+  E++ +++   n+v  ega+r er+e ++kWr+r+++aGF+pv+l   +a+q+ +     +  g  v+ e+g l lgWk+r + +
  TRIDC2BG060090.1 447 RDSADRARAEEA-VANMSANAVGREGADRLERCEVFGKWRARFGMAGFRPVALAAGIADQVMARAGAPP-PGLVVKPENGVLRLGWKQRVVAV 537
                       ************.778889******************************************99998888.9********************** PP

              GRAS 370 vSaWr 374
                       +SaWr
  TRIDC2BG060090.1 538 ASAWR 542
                       ****8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 542 aa     Download sequence    
GGVPAQPFFS GSSLGGGLAS PSSTLSSLTT ASRAAMPLIQ HHVHRQPPLV PSSAHAQTQA  60
QAHALAVARV PAPSAVGSEL SILQDLEKQL LGDDDEAEPA MSGTGSTVTS SEWEETIQRL  120
NSITAASSPP LYAEATPNNK NNYSAAMTGS PSNSSTSTAS SSASCSPPIS ATTSRQLLSE  180
AAAAIADGNL ETAAANLATL KRAANPRGDA EQRLVAVMVA ALSSRIAPTA SASSQQLADL  240
CGAEHHTGSQ LLHDITPCFR LALDAANIAI VEAVAGHRVI HLVDFDINAP QHAALIQRLA  300
DRRVPGTCLQ VTAVTDPTSP FTQSLAATLP GVGERLKKLA ELAGIEYHFR MISCRAVEIE  360
ASKLGCEPGE ALAVNLAFAL SHVPDESVSP ANPRDELLRR VRALGPQVVT LVEQELNSNT  420
APLATRFSDA YLHYGAILDA LDSTVSRDSA DRARAEEAVA NMSANAVGRE GADRLERCEV  480
FGKWRARFGM AGFRPVALAA GIADQVMARA GAPPPGLVVK PENGVLRLGW KQRVVAVASA  540
WR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.13e-82GRAS family protein