PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG060470.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 227aa MW: 24077.2 Da PI: 10.2006

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG060470.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.2	3.5e-24	134	178	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 ++ep rCrRtDGKkWRCsr v++g+k+CErH+hrgr r rk++e+ TRIDC2BG060470.3 134 EPEPDRCRRTDGKKWRCSRGVMPGHKYCERHVHRGRGRARKPVEA 178 699***************************************985 PP
2	QLQ	55.8	1.4e-19	68	104	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 sa+T +Q q+L++Q+l+y+y+aan+PvP +L+++i+k TRIDC2BG060470.3 68 SALTFMQRQELEHQVLIYRYFAANAPVPVHLVLPIWK 104 799*********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence
MTERRQEHSP PSKLPRLSGP DADDNDGAGT VTMAAPSPLV LGLGLGVGGS SSDSGRGDAE 60 ASAATRPSAL TFMQRQELEH QVLIYRYFAA NAPVPVHLVL PIWKSVAASS SAPQRFPSLA 120 GLGSMCYDHR SSMEPEPDRC RRTDGKKWRC SRGVMPGHKY CERHVHRGRG RARKPVEAAP 180 ATSAIPIRAM HAADAQGATS AHAAPPQRLG FSSPAGVYLA HGTARAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36400.1	7e-34	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG060470.3