PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG060690.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 198aa    MW: 20649.9 Da    PI: 6.2627
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG060690.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.64.9e-161260255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                       y+G+r  ++ g+Wv+eIr+p+    + +r++lg+f tae+Aa a++ a+++l+g
  TRIDC2BG060690.2 12 FYRGIR--SRCGKWVSEIREPR----KaRRIWLGTFPTAEMAAVAYDVAAQALRG 60
                      69***5..779*********94....36*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MSGHGSSGKH PFYRGIRSRC GKWVSEIREP RKARRIWLGT FPTAEMAAVA YDVAAQALRG  60
PDAALNFPAL AATRRAPAST SADDIRAAAA AAAVSVQHDR AGGGIAPAAA GSALQLQQQL  120
SGSSAAAASA SGAAQQDQAG IGFNQFFLDE EALFETPQFL RNMAAGMMMS PPRLSPDSSD  180
ESPDPSEAGE SLWSYRDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.14e-21ERF family protein