PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG060950.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 302aa    MW: 32903.3 Da    PI: 5.3333
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG060950.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind109.52.5e-34131042102
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       Fl+k+y +++d+e++++isw+e+g++fvv+ + ef++++Lpk FkhsnfaSFvRQLn+YgF+k+  ++         weF+++ F+kg+k+ll
  TRIDC2BG060950.2  13 FLTKTYAMVDDPETDDTISWNESGTAFVVWRRAEFERDLLPKNFKHSNFASFVRQLNTYGFRKIGLDR---------WEFANECFRKGEKRLL 96 
                       9****************************************************************999.........**************** PP

                       XXXXXXXX CS
      HSF_DNA-bind  95 ekikrkks 102
                         i+r+k 
  TRIDC2BG060950.2  97 GAIQRRKG 104
                       *****986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MASPALGAGT PPFLTKTYAM VDDPETDDTI SWNESGTAFV VWRRAEFERD LLPKNFKHSN  60
FASFVRQLNT YGFRKIGLDR WEFANECFRK GEKRLLGAIQ RRKGSGAGAP PPAMMATPIA  120
TAIPISPTPT SSGGDAAVSS SPPPGLALVA TGAMAELEEE NARLRRENAR LARELARARR  180
VCDGVRHLVW RYDHGGDEVG EEDERHGAAG AKPMLFGVAI GRKRSREDGH GGGDEENGAE  240
EDGEDEEEEQ EHDDDDERHA ARREQGKAMK TERSDLNVLS LSVRAAAAAR PDGGSRDRSG  300
NH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11660.15e-44HSF family protein