PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG061400.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 177aa MW: 20877.1 Da PI: 10.0804

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG061400.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	85.9	3.6e-27	43	92	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ++i+led+++yF+lpi++A+++L+++l++LK++CRq+GI+RWPhRk+ksl TRIDC2BG061400.3 43 ASITLEDIAQYFHLPIREASRTLKIGLSILKKKCRQHGIPRWPHRKLKSL 92 68**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 177 aa Download sequence
MQRTEFLLSK RQGLIPMSDP NLVKADLLAP AEKQRRAHRE YIASITLEDI AQYFHLPIRE 60 ASRTLKIGLS ILKKKCRQHG IPRWPHRKLK SLDSLIHDLE FVIDDETERD GVKQEDHMQD 120 EKENQDAIEA LAKRKRMLET EKATIQQKPT LDLMAETKQF RQYVFKRKYR AKTLVSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35590.1	2e-38	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG061400.3