PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG061400.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 224aa MW: 26262 Da PI: 8.459

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG061400.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	85.3	5.5e-27	90	139	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ++i+led+++yF+lpi++A+++L+++l++LK++CRq+GI+RWPhRk+ksl TRIDC2BG061400.4 90 ASITLEDIAQYFHLPIREASRTLKIGLSILKKKCRQHGIPRWPHRKLKSL 139 68**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 224 aa Download sequence
FIFLFRNPRL MCVPSLYNDL TKVFQFQKVE EKVPGLVQCD SDEKLTSSDA KDRVSVKQEA 60 GSDTDERPQF GEDLLAPAEK QRRAHREYIA SITLEDIAQY FHLPIREASR TLKIGLSILK 120 KKCRQHGIPR WPHRKLKSLD SLIHDLEFVI DDETERDGVK QEDHMQDEKE NQDAIEALAK 180 RKRMLETEKA TIQQKPTLDL MAETKQFRQY VFKRKYRAKT LVSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35590.1	6e-40	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG061400.4