PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG061400.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Nin-like
Protein Properties Length: 163aa    MW: 19198.1 Da    PI: 9.9941
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG061400.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK86.13e-272978352
            RWP-RK  3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52
                      ++i+led+++yF+lpi++A+++L+++l++LK++CRq+GI+RWPhRk+ksl
  TRIDC2BG061400.5 29 ASITLEDIAQYFHLPIREASRTLKIGLSILKKKCRQHGIPRWPHRKLKSL 78
                      68**********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
PPATFGPCVR QHLLAPAEKQ RRAHREYIAS ITLEDIAQYF HLPIREASRT LKIGLSILKK  60
KCRQHGIPRW PHRKLKSLDS LIHDLEFVID DETERDGVKQ EDHMQDEKEN QDAIEALAKR  120
KRMLETEKAT IQQKPTLDLM AETKQFRQYV FKRKYRAKTL VSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35590.14e-38Nin-like family protein