PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG061400.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 230aa MW: 25974.2 Da PI: 9.2393

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG061400.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	85.2	5.7e-27	96	145	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ++i+led+++yF+lpi++A+++L+++l++LK++CRq+GI+RWPhRk+ksl TRIDC2BG061400.6 96 ASITLEDIAQYFHLPIREASRTLKIGLSILKKKCRQHGIPRWPHRKLKSL 145 68**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
GAFRSSSSAG SAPLLLYSSL AVLLCFCAPP LDPPLCCCTP PLLSSSAFVL LPWIRPSAAV 60 LLLDPKAMAN KDPSAVVANL LAPAEKQRRA HREYIASITL EDIAQYFHLP IREASRTLKI 120 GLSILKKKCR QHGIPRWPHR KLKSLDSLIH DLEFVIDDET ERDGVKQEDH MQDEKENQDA 180 IEALAKRKRM LETEKATIQQ KPTLDLMAET KQFRQYVFKR KYRAKTLVSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35590.1	1e-37	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG061400.6