PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG061420.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Nin-like
Protein Properties Length: 350aa    MW: 39885.8 Da    PI: 9.344
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG061420.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK80.41.8e-25203252352
            RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                       ++i+l d++ yF+lpi++A++ L++++++LK++CRqyGI+RWPhRkiksl
  TRIDC2BG061420.2 203 ASITLVDIAPYFHLPIREASRALKIGVSILKQKCRQYGIPRWPHRKIKSL 252
                       78**********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MDAAAAAAVT TLSALAVFAS TLHQGAVRSV HGYRVVAMGG RCAWDRWVER EFAFSPTSCR  60
EVPLPAAAPR ILPVEWRGRP AYREGQVLGA WRCILAFDSI AAVPLPPMPP PMLCPFRNPS  120
LVFVPSLYND LYMVFQFQKF QQAPELVKRD SDEKSTRLDA EDKTCDVEVK EESGSDSDED  180
PQSGEELPAH AERRRRAKKQ HIASITLVDI APYFHLPIRE ASRALKIGVS ILKQKCRQYG  240
IPRWPHRKIK SLDSLISDLE SAAVDHVFVM DDTDGDVVQK ETRRQREKEK EEKEKEKQEA  300
IRALAKRKRL LESEKEIIQQ KPALDLMAET KLFREDVFKR RYRAKRLPGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35590.12e-41Nin-like family protein