PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG061420.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Nin-like
Protein Properties Length: 129aa    MW: 14985 Da    PI: 7.5057
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG061420.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK60.53e-1988129344
            RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRW 44 
                       ++i+l d++ yF+lpi++A++ L++++++LK++CRqyGI+RW
  TRIDC2BG061420.5  88 ASITLVDIAPYFHLPIREASRALKIGVSILKQKCRQYGIPRW 129
                       78**************************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    
FRYPSLVFVP SLYNDLYMVF QFQKFQQAPE LVKRDSDEKS TRLDAEDKTC DVEVKEESGS  60
DSDEDPQSGE ELPAHAERRR RAKKQHIASI TLVDIAPYFH LPIREASRAL KIGVSILKQK  120
CRQYGIPRW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35590.18e-16Nin-like family protein