PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG061420.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Nin-like
Protein Properties Length: 181aa    MW: 20748.8 Da    PI: 8.6214
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG061420.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK826e-2692141352
            RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                       ++i+l d++ yF+lpi++A++ L++++++LK++CRqyGI+RWPhRkiksl
  TRIDC2BG061420.6  92 ASITLVDIAPYFHLPIREASRALKIGVSILKQKCRQYGIPRWPHRKIKSL 141
                       78**********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
SVLIVRNPSL VFVPSLYNDL YMVFQFQKFQ QAPELVKRDS DEKSTRLDAE DKTCDVEVKE  60
ESGSDSDEDP QSGEELPAHA ERRRRAKKQH IASITLVDIA PYFHLPIREA SRALKIGVSI  120
LKQKCRQYGI PRWPHRKIKS LDSLISDLEV NLAAPSVPLR LIIYLFRKHS CATFGCSLQQ  180
W
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35590.13e-25Nin-like family protein