PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG062210.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 404aa MW: 43880.7 Da PI: 4.6136

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG062210.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.5	4.9e-13	222	269	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++h + ErrRR+++N+ f L++l+P+ K++Ka+iL +++ Y+++L+ TRIDC2BG062210.2 222 KNHVISERRRREKLNEMFLILKSLVPSiH------KVDKASILAETIAYLRELE 269 6899*********************66......**************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
YLCRLNQTAS IQTVACIPLM GGVLELGTTN TVLEDRDMVN RINTSFWDLK FPTSEEPNSS 60 PSADDTGDAD IVFEDLNHES IAAIIPGELE LGEVECLSDG NLERIMKEIN GFYGLCDELD 120 VGALEENWIM GGSLEVMSAS EVSMAPAATD GITDGAVTFS SVEPSRSSCF TAWKRSLDST 180 EDVDTSVAGE SQKLLKKVLA GGAWANNGGD GTARAQESTN TKNHVISERR RREKLNEMFL 240 ILKSLVPSIH KVDKASILAE TIAYLRELEQ KVEELESNRA AATAVRKLHD VSGKKVLAGS 300 KRKASELGGD DADRVLSKED VPSNVVNVTV TEKEVLLEVQ CRWKELLMTQ VFDAIKSLRL 360 GVLSVRASTP DGLLALKIRA QFAGPAAVEP GMISEALQRA IRRR

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

YLCRLNQTAS IQTVACIPLM GGVLELGTTN TVLEDRDMVN RINTSFWDLK FPTSEEPNSS  60
PSADDTGDAD IVFEDLNHES IAAIIPGELE LGEVECLSDG NLERIMKEIN GFYGLCDELD  120
VGALEENWIM GGSLEVMSAS EVSMAPAATD GITDGAVTFS SVEPSRSSCF TAWKRSLDST  180
EDVDTSVAGE SQKLLKKVLA GGAWANNGGD GTARAQESTN TKNHVISERR RREKLNEMFL  240
ILKSLVPSIH KVDKASILAE TIAYLRELEQ KVEELESNRA AATAVRKLHD VSGKKVLAGS  300
KRKASELGGD DADRVLSKED VPSNVVNVTV TEKEVLLEVQ CRWKELLMTQ VFDAIKSLRL  360
GVLSVRASTP DGLLALKIRA QFAGPAAVEP GMISEALQRA IRRR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	228	233	ERRRRE
2	229	234	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G63650.1	1e-32	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG062210.2