PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG062210.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 394aa MW: 42764.4 Da PI: 4.5727

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG062210.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.6	4.7e-13	212	259	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++h + ErrRR+++N+ f L++l+P+ K++Ka+iL +++ Y+++L+ TRIDC2BG062210.3 212 KNHVISERRRREKLNEMFLILKSLVPSiH------KVDKASILAETIAYLRELE 259 6899*********************66......**************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
FQTVACIPLM GGVLELGTTN TVLEDRDMVN RINTSFWDLK FPTSEEPNSS PSADDTGDAD 60 IVFEDLNHES IAAIIPGELE LGEVECLSDG NLERIMKEIN GFYGLCDELD VGALEENWIM 120 GGSLEVMSAS EVSMAPAATD GITDGAVTFS SVEPSRSSCF TAWKRSLDST EDVDTSVAGE 180 SQKLLKKVLA GGAWANNGGD GTARAQESTN TKNHVISERR RREKLNEMFL ILKSLVPSIH 240 KVDKASILAE TIAYLRELEQ KVEELESNRA AATAVRKLHD VSGKKVLAGS KRKASELGGD 300 DADRVLSKED VPSNVVNVTV TEKEVLLEVQ CRWKELLMTQ VFDAIKSLRL GVLSVRASTP 360 DGLLALKIRA QFAGPAAVEP GMISEALQRA IRRR

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

FQTVACIPLM GGVLELGTTN TVLEDRDMVN RINTSFWDLK FPTSEEPNSS PSADDTGDAD  60
IVFEDLNHES IAAIIPGELE LGEVECLSDG NLERIMKEIN GFYGLCDELD VGALEENWIM  120
GGSLEVMSAS EVSMAPAATD GITDGAVTFS SVEPSRSSCF TAWKRSLDST EDVDTSVAGE  180
SQKLLKKVLA GGAWANNGGD GTARAQESTN TKNHVISERR RREKLNEMFL ILKSLVPSIH  240
KVDKASILAE TIAYLRELEQ KVEELESNRA AATAVRKLHD VSGKKVLAGS KRKASELGGD  300
DADRVLSKED VPSNVVNVTV TEKEVLLEVQ CRWKELLMTQ VFDAIKSLRL GVLSVRASTP  360
DGLLALKIRA QFAGPAAVEP GMISEALQRA IRRR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	218	223	ERRRRE
2	219	224	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G63650.1	1e-32	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG062210.3