PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG063080.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family SBP
Protein Properties Length: 249aa    MW: 26377.9 Da    PI: 12.5593
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG063080.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP72.95.6e-232433677
                      TTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
               SBP 36 sgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77
                      +g eqrfCqqCsrfh++ efD++krsCrrrLa+hnerrrk++
  TRIDC2BG063080.1  2 HGAEQRFCQQCSRFHAMAEFDDAKRSCRRRLAGHNERRRKSN 43
                      789*************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
VHGAEQRFCQ QCSRFHAMAE FDDAKRSCRR RLAGHNERRR KSNASDAMAR GSVNCCRGGV  60
VGARFRAVRR PADVPGWCSL SSVIGQSRPL ASPDDARRRI LRPLQQRRAG RAHRREPRGA  120
PGVPLLPPAL GWPAGRGRDG AGLAPSAPAG PARPRGGGQW CRPRPRSSSS SSGARHARPH  180
AGARHGGLAL PAHGAGQASR GRRRGPWLGR VDASAGCPRR LRSPHGASTT VRSMGAAGAL  240
VIVSTVQST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33810.16e-20SBP family protein