PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG063080.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

SBP

Protein Properties

Length: 354aa MW: 36982.7 Da PI: 10.2556

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG063080.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	128.8	2.1e-40	101	177	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +CqvegC++ l+ akeyhrrhkvCe+hskap v+v+g eqrfCqqCsrfh++ efD++krsCrrrLa+hnerrrk++ TRIDC2BG063080.2 101 RCQVEGCHMVLAGAKEYHRRHKVCEAHSKAPRVIVHGAEQRFCQQCSRFHAMAEFDDAKRSCRRRLAGHNERRRKSN 177 6**************************************************************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MEGDGNARSR ATLAWDLGVQ WAPAASAAYP QHFLPPPGVA SQQQHMQQEL TSLKLGKRPS 60 NLAGGQVAQM DGSGVGGGRA VVEGKRKEKA AGATATAAMP RCQVEGCHMV LAGAKEYHRR 120 HKVCEAHSKA PRVIVHGAEQ RFCQQCSRFH AMAEFDDAKR SCRRRLAGHN ERRRKSNASD 180 AMARGSAHAH GVASLVHGFV PYGGLPTSPA GALSLLSSAR AAPWLVPTTP GDVFSARSSS 240 AALDELIAEN RAALLACHFF PQRSAGRPAA AEMAPAWHQA HQQAPPGHAV VGNGAGRDHG 300 APPPPAGHVT LDLMQAPATA GLPFRPMAQG RPAEDGDAGR GSGVWTPLQG AHAV

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MEGDGNARSR ATLAWDLGVQ WAPAASAAYP QHFLPPPGVA SQQQHMQQEL TSLKLGKRPS  60
NLAGGQVAQM DGSGVGGGRA VVEGKRKEKA AGATATAAMP RCQVEGCHMV LAGAKEYHRR  120
HKVCEAHSKA PRVIVHGAEQ RFCQQCSRFH AMAEFDDAKR SCRRRLAGHN ERRRKSNASD  180
AMARGSAHAH GVASLVHGFV PYGGLPTSPA GALSLLSSAR AAPWLVPTTP GDVFSARSSS  240
AALDELIAEN RAALLACHFF PQRSAGRPAA AEMAPAWHQA HQQAPPGHAV VGNGAGRDHG  300
APPPPAGHVT LDLMQAPATA GLPFRPMAQG RPAEDGDAGR GSGVWTPLQG AHAV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	1e-36	SBP family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG063080.2