PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG063080.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

SBP

Protein Properties

Length: 179aa MW: 18913.5 Da PI: 10.9892

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG063080.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	72.9	5.5e-23	61	108	1	48
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSS CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsr 48 +CqvegC++ l+ akeyhrrhkvCe+hskap v+v+g eqrfCqqCsr TRIDC2BG063080.3 61 RCQVEGCHMVLAGAKEYHRRHKVCEAHSKAPRVIVHGAEQRFCQQCSR 108 6**********************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 179 aa Download sequence
SQQQHMQQEL TSLKLGKRPS NLAGGQVAQM DGSGVGGGRA VVEGKRKEKA AGATATAAMP 60 RCQVEGCHMV LAGAKEYHRR HKVCEAHSKA PRVIVHGAEQ RFCQQCSRRT YVRAESLSRA 120 SVDSLVCVYM RAASTRWRSS TTPSGAAGGG LPATTSGAGR ATPATPWPGA LRTHTVIHV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	2e-21	SBP family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG063080.3