PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG063430.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 331aa    MW: 36466 Da    PI: 8.4711
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG063430.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.26.7e-122570146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                      +g+W +eEd  l++ v+ +G+++W++I ++  + Rt+k+c++rw +
  TRIDC2BG063430.2 25 KGPWMAEEDAVLLEHVRTHGPRDWSSIRSKGALQRTGKSCRLRWVN 70
                      79*************************998889***********87 PP
2Myb_DNA-binding41.43.3e-1381121345
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                       +++++E+   +++ +q+G++ W++Ia +++ gRt++++k++w 
  TRIDC2BG063430.2  81 KFSADEERVVIELQAQFGNK-WARIATYLP-GRTDNDVKNFWS 121
                       79******************.*********.***********5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MARAPGGAAR RRGGRRDGSG EAVRKGPWMA EEDAVLLEHV RTHGPRDWSS IRSKGALQRT  60
GKSCRLRWVN KLRPNLKTGC KFSADEERVV IELQAQFGNK WARIATYLPG RTDNDVKNFW  120
STRQKRLARL LRAPLRARPS KTRSSNTKAP GSSVESAMVS QGSCQDHVPS VGNSSGGQSF  180
AAAPPMEYQD TARISHDQMC PGFLSFEPLP LQAAAPATEG EASSSNAAYY QLAPESSFYH  240
HPYHLLEFPG LPERCSVDPG FVGASAMDDL AYQELLPPPH PAPMMMPFFG MEYARDAIKV  300
ETRDNFFDDL PPDVFDSFDQ VPPPFSPSAT N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60460.15e-63MYB family protein