PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG063680.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 123aa    MW: 13770.7 Da    PI: 10.7192
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG063680.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.13.7e-171162256
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                      +y+GVr+++ +g+++AeIrdp+ +g   r +lg+++t  eAa+a+++a+ +++g+
  TRIDC2BG063680.1 11 KYRGVRQRP-WGKYAAEIRDPKRRG--YREWLGTYDTSVEAARAYDRAAFRMRGA 62
                      8********.**********96655..888***********************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    
PAPAPVEDLR KYRGVRQRPW GKYAAEIRDP KRRGYREWLG TYDTSVEAAR AYDRAAFRMR  60
GAKAILNFPN EVGTRGAQLW APPPAGPASR AAGATNKRKR SQDEDSAFLL DGCLMNMILF  120
LFG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.11e-33ERF family protein