PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG063950.10

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 758aa MW: 86108.6 Da PI: 7.5762

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG063950.10	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.7	6.1e-21	50	133	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 k+Y +YA +vGFsvrk k+ ++g +r +vCs+eg+r+++ k r+ +etrtgC a++ + ++ +gk++vt+++++HnH+la TRIDC2BG063950.10 50 KYYVSYAGNVGFSVRKGLWDKTAKSG-SRSRFYVCSREGFRAKNLPK-----RPCPETRTGCPARFSIMLTPSGKYRVTEFVQDHNHQLA 133 69******************8888.8999*******98877.....9*********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 758 aa Download sequence
RRAVPRQGGP ADKPEEKAEE EPELPPEVVA NAGGVPIIGM VFESEEKACK YYVSYAGNVG 60 FSVRKGLWDK TAKSGSRSRF YVCSREGFRA KNLPKRPCPE TRTGCPARFS IMLTPSGKYR 120 VTEFVQDHNH QLAGPIDIGM LKSQRLLSKV QSGNGNAISI PSRYKNYLRT KSTKDMNAGD 180 FGALTDYFRS MKSDNPSFYY AIQVDENDKA ANVFWADARS IFDYHYFSDV ICFDMTYKLN 240 DYSRPLALFL GMNHHRQMVI FGAAFLYDET AESFKWLLET FKSAMCGKQP KTILTDRSAA 300 LKEALDLAWP GTVHRYCLWQ IYQDAAKSLA HVFCISEEFT HDFSHCVFDV EDGQEFVETW 360 NVIMEKYNLK ENKLLNELYE GRENWALPYG RQIFSGDIKS MVRAETLGIR MKEYLGCEKE 420 LSPFLKFFES SVEKRRQEEI QADYQASQRE PRTPLPLLWQ AANLYTPINF ELFRKEYEEC 480 MDCMVYGCGE FGSLSEYMIT VKNRTKEQLV RFDSSDGTVA CTCKKFETAG ILCCHILKVY 540 ELKNVKEIPP QYLLKRWSKD AKLGTVHEID GFSFDSHIGS CVPERYAALC RLFYKIASKA 600 AANVETFSMV ASQSDQLNEG IERTLQSTLA AKSSIVHSIK DQLTRMAQND YPLGNSSEAQ 660 KSTGKKMSEV THRGNCQETN KRQKQRRGHS GEAAAGPRER EVNVTDQFLP DQLMQGHYVL 720 GHNFGISTSQ NIRDDLNQFG QASAVPILQQ QPFPGNGP

Sequence ? help Back to Top

Protein Sequence Length: 758 aa Download sequence

RRAVPRQGGP ADKPEEKAEE EPELPPEVVA NAGGVPIIGM VFESEEKACK YYVSYAGNVG  60
FSVRKGLWDK TAKSGSRSRF YVCSREGFRA KNLPKRPCPE TRTGCPARFS IMLTPSGKYR  120
VTEFVQDHNH QLAGPIDIGM LKSQRLLSKV QSGNGNAISI PSRYKNYLRT KSTKDMNAGD  180
FGALTDYFRS MKSDNPSFYY AIQVDENDKA ANVFWADARS IFDYHYFSDV ICFDMTYKLN  240
DYSRPLALFL GMNHHRQMVI FGAAFLYDET AESFKWLLET FKSAMCGKQP KTILTDRSAA  300
LKEALDLAWP GTVHRYCLWQ IYQDAAKSLA HVFCISEEFT HDFSHCVFDV EDGQEFVETW  360
NVIMEKYNLK ENKLLNELYE GRENWALPYG RQIFSGDIKS MVRAETLGIR MKEYLGCEKE  420
LSPFLKFFES SVEKRRQEEI QADYQASQRE PRTPLPLLWQ AANLYTPINF ELFRKEYEEC  480
MDCMVYGCGE FGSLSEYMIT VKNRTKEQLV RFDSSDGTVA CTCKKFETAG ILCCHILKVY  540
ELKNVKEIPP QYLLKRWSKD AKLGTVHEID GFSFDSHIGS CVPERYAALC RLFYKIASKA  600
AANVETFSMV ASQSDQLNEG IERTLQSTLA AKSSIVHSIK DQLTRMAQND YPLGNSSEAQ  660
KSTGKKMSEV THRGNCQETN KRQKQRRGHS GEAAAGPRER EVNVTDQFLP DQLMQGHYVL  720
GHNFGISTSQ NIRDDLNQFG QASAVPILQQ QPFPGNGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-106	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG063950.10