PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG063950.12

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 704aa MW: 80210.2 Da PI: 7.807

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG063950.12	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.8	5.5e-21	29	112	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 k+Y +YA +vGFsvrk k+ ++g +r +vCs+eg+r+++ k r+ +etrtgC a++ + ++ +gk++vt+++++HnH+la TRIDC2BG063950.12 29 KYYVSYAGNVGFSVRKGLWDKTAKSG-SRSRFYVCSREGFRAKNLPK-----RPCPETRTGCPARFSIMLTPSGKYRVTEFVQDHNHQLA 112 69******************8888.8999*******98877.....9*********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 704 aa Download sequence
PELPPEVVAN AGGVPIIGMV FESEEKACKY YVSYAGNVGF SVRKGLWDKT AKSGSRSRFY 60 VCSREGFRAK NLPKRPCPET RTGCPARFSI MLTPSGKYRV TEFVQDHNHQ LAGPIDIGML 120 KSQRLLSKVQ SGNGNAISIP SRYKNYLRTK STKDMNAGDF GALTDYFRSM KSDNPSFYYA 180 IQVDENDKAA NVFWADARSI FDYHYFSDVI CFDMTYKLND YSRPLALFLG MNHHRQMVIF 240 GAAFLYDETA ESFKWLLETF KSAMCGKQPK TILTDRSAAL KEALDLAWPG TVHRYCLWQI 300 YQDAAKSLAH VFCISEEFTH DFSHCVFDVE DGQEFVETWN VIMEKYNLKE NKLLNELYEG 360 RENWALPYGR QIFSGDIKSM VRAETLGIRM KEYLGCEKEL SPFLKFFESS VEKRRQEEIQ 420 ADYQASQREP RTPLPLLWQA ANLYTPINFE LFRKEYEECM DCMVYGCGEF GSLSEYMITV 480 KNRTKEQLVR FDSSDGTVAC TCKKFETAGI LCCHILKVYE LKNVKEIPPQ YLLKRWSKDA 540 KLGTVHEIDG FSFDSHIGSC VPERYAALCR LFYKIASKAA ANVETFSMVA SQSDQLNEGI 600 ERTLQSTLAA KSSIVHSIKD QLTRMAQNDY PLGNSSEAQK STGKKMSEVT HRGNCQETNK 660 RQKQRRGHSG EAAAGPRERE VNVTDQFLPD QLMQASAVPI LQQQ

Sequence ? help Back to Top

Protein Sequence Length: 704 aa Download sequence

PELPPEVVAN AGGVPIIGMV FESEEKACKY YVSYAGNVGF SVRKGLWDKT AKSGSRSRFY  60
VCSREGFRAK NLPKRPCPET RTGCPARFSI MLTPSGKYRV TEFVQDHNHQ LAGPIDIGML  120
KSQRLLSKVQ SGNGNAISIP SRYKNYLRTK STKDMNAGDF GALTDYFRSM KSDNPSFYYA  180
IQVDENDKAA NVFWADARSI FDYHYFSDVI CFDMTYKLND YSRPLALFLG MNHHRQMVIF  240
GAAFLYDETA ESFKWLLETF KSAMCGKQPK TILTDRSAAL KEALDLAWPG TVHRYCLWQI  300
YQDAAKSLAH VFCISEEFTH DFSHCVFDVE DGQEFVETWN VIMEKYNLKE NKLLNELYEG  360
RENWALPYGR QIFSGDIKSM VRAETLGIRM KEYLGCEKEL SPFLKFFESS VEKRRQEEIQ  420
ADYQASQREP RTPLPLLWQA ANLYTPINFE LFRKEYEECM DCMVYGCGEF GSLSEYMITV  480
KNRTKEQLVR FDSSDGTVAC TCKKFETAGI LCCHILKVYE LKNVKEIPPQ YLLKRWSKDA  540
KLGTVHEIDG FSFDSHIGSC VPERYAALCR LFYKIASKAA ANVETFSMVA SQSDQLNEGI  600
ERTLQSTLAA KSSIVHSIKD QLTRMAQNDY PLGNSSEAQK STGKKMSEVT HRGNCQETNK  660
RQKQRRGHSG EAAAGPRERE VNVTDQFLPD QLMQASAVPI LQQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-107	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG063950.12